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Vijini Mallawaarachchi
Vijini Mallawaarachchi

9K Followers

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Published in

Towards Data Science

·Pinned

10 Graph Algorithms Visually Explained

A quick introduction to 10 basic graph algorithms with examples and visualisations — Graphs have become a powerful means of modelling and capturing data in real-world scenarios such as social media networks, web pages and links, and locations and routes in GPS. If you have a set of objects that are related to each other, then you can represent them using a graph. …

Algorithms

8 min read

10 Graph Algorithms Visually Explained
10 Graph Algorithms Visually Explained
Algorithms

8 min read


Published in

Towards Data Science

·Dec 8, 2022

All You Need to Know about Publishing Software on Bioconda

Publishing Python packages related to bioinformatics on Bioconda — Have you had trouble installing packages and running a gazillion commands to install dependencies? If you are lucky (which most of the time you won’t be), you will end up installing the package without having any dependency issues or version conflicts. Working in interdisciplinary sciences has made me aware of…

Bioinformatics

7 min read

All You Need to Know about Publishing Software on Bioconda
All You Need to Know about Publishing Software on Bioconda
Bioinformatics

7 min read


Published in

Towards Data Science

·Aug 24, 2021

How Good are Your Metagenomic Binning Results?

Strategies and tools for evaluating metagenomic binning results — Natural environments such as lake water, soil and niches of the human body (gut, skin, etc.) are home to trillions of microbes. These microscopic communities are complex and diverse, and we can learn a lot about their effects by studying their composition and interactions. If you have come across my…

Metagenomics

5 min read

How Good are Your Metagenomic Binning Results?
How Good are Your Metagenomic Binning Results?
Metagenomics

5 min read


Published in

The Brain is a Noodle

·Dec 4, 2020

My Love of Hand-making Cards

Poetry Prompt: Greeting Cards — As I make greeting cards For my love of cardmaking and creativity I collect random leftover stuff When I saw the notification on Medium that Rochelle Silva has tagged me in her poem Impossible to Throw Away, I felt so happy to be reminded of how I have been making…

Poetry

2 min read

My Love of Hand-making Cards
My Love of Hand-making Cards
Poetry

2 min read


Published in

Towards Data Science

·Dec 2, 2020

Matching of Bipartite Graphs using NetworkX

A simple introduction to matching in bipartite graphs with Python code examples — Graph matching can be applied to solve different problems including scheduling, designing flow networks and modelling bonds in chemistry. In this article, I will give a basic introduction to bipartite graphs and graph matching, along with code examples using the python library NetworkX. Before moving to the nitty-gritty details of…

Data Science

8 min read

Matching of Bipartite Graphs using NetworkX
Matching of Bipartite Graphs using NetworkX
Data Science

8 min read


Published in

The Computational Biology Magazine

·Nov 26, 2020

Antibiotic Resistance: A Medical Crisis

What you must know about antibiotic resistance — Antibiotic resistance occurs when bacteria develop resistance towards the medicines that are designed to destroy them. The bacteria will not respond to medicine and continue to grow, leading to severe complications and even death. This has led to serious implications, especially in people with chronic illnesses as we become unable…

Science

6 min read

Antibiotic Resistance: A Medical Crisis
Antibiotic Resistance: A Medical Crisis
Science

6 min read


Nov 23, 2020

What I Learned While Writing My First Journal Article

5 things I learned while writing my first article for a top journal — If you are into research like I am, you may know that getting your work published in a top journal is a huge achievement and you can gain more reach to your work. I was able to publish my first piece of work in my PhD in a top journal…

Research

7 min read

What I learned while writing my first journal article
What I learned while writing my first journal article
Research

7 min read


Published in

The Brain is a Noodle

·Nov 21, 2020

End of a Day

A poem at the end of a day —

Poetry

1 min read

End of a Day
End of a Day
Poetry

1 min read


Published in

The Brain is a Noodle

·Nov 19, 2020

Under the Sea

A sight from under the sea — Blue as the sky Filled with might As waters sigh In currents of fight Bubbles and speckles Splashing on waves Nubbles and freckles Crashing on caves Home for the world Of the aquatic living All being whirled In the wail of reliving The beauty in blue She covers the world As they…

Poetry

1 min read

Under the Sea
Under the Sea
Poetry

1 min read


Nov 15, 2020

Musical Punctuation

Punctuation in music — Similar to languages, music also has its own punctuation marks to help the listeners understand and enjoy what is played. If it weren’t for music’s punctuation marks, it would have been monotonous and boring to listen. Don’t worry, I won’t be going into technical details of music. This article is…

Poem

2 min read

Musical Punctuation
Musical Punctuation
Poem

2 min read

Vijini Mallawaarachchi

Vijini Mallawaarachchi

9K Followers

Bioinformatician | Computational Genomics 🧬 | Data Science 👩🏻‍💻 | Music 🎵 | Astronomy 🔭 | Travel 🎒 | vijinimallawaarachchi.com

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